ISOLATION AND IDENTIFICATION OF ESKAPEE PATHOGENS IN HOSPITAL WASTEWATER OF KATHMANDU VALLEY

Authors

  • Gitanjali Shrestha Tri-Chandra Multiple Campus, Ghantaghar, Kathmandu, Nepal https://orcid.org/0000-0002-7932-0132
  • Bijeta Kumal Tri-Chandra Multiple Campus, Ghantaghar, Kathmandu, Nepal
  • Jay Narayan Acharya Central Department of Microbiology, Kirtipur, Nepal
  • Saroj Paudel Nepalese Farming Institute, Old Baneshwor, Kathmandu, Nepal
  • Sarita Manandhar Tri-Chandra Multiple Campus, Ghantaghar, Kathmandu, Nepal

DOI:

https://doi.org/10.3126/jist.v31i1.93219

Keywords:

Antibiotic susceptibility, ESKAPEE pathogens, Hospital wastewater, Multidrug resistance

Abstract

A collection of ESKAPEE pathogens- Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa, Enterobacter species, and Escherichia coli  are antibiotic resistant bacteria and  commonly found in hospital and municipal wastewater. This study isolated and identified ESKAPEE pathogens from hospital waste water (HWW), tested their physico-chemical parameters and characterized antibiotic resistant profiles. A cross-sectional study was conducted from March 2024 to May 2024 during which nine HWW samples were taken by Grab method from 7 different major hospitals across Kathmandu Valley, Nepal. Isolation and identification of pathogens were based on Bergey’s Manual of Determinative Bacteriology. Antibiotic susceptibility testing (AST) was performed using Kirby–Bauer disk diffusion method. Out of 19 isolates, the most frequently pathogens were E.coli (32%), Klebsiella pneumonia (26%), and Enterococcus faecium (21%). Linezolid (100%) showed the highest effectiveness against Gram-positive bacteria whereas Amikacin (92%), Cotrimoxazole (85%), and Chloramphenicol (85%) for the Gram-negative bacteria. Ampicillin (85%) demonstrated the highest resistance, followed by Oxacillin and CO-trimoxazole . The multidrug resistance (MDR) isolates was found to be 42% along with low dissolved oxygen (DO) value. Continuous surveillance and improved wastewater management practices are essential to mitigate the spread of these pathogens and protect public health in Kathmandu Valley and beyond.

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References

Abdelwahab, R., Alhammadi, M. M., Hassan, E. A., Ahmed, E. H., Abu-Faddan, N. H., Daef, E. A., Busby, S. J. W., & Browning, D. F. (2021). Antimicrobial Resistance and Comparative Genome Analysis of Klebsiella pneumoniae Strains Isolated in Egypt. Microorganisms, 9(9), 1880. https://doi.org/10.3390/microorganisms9091880

Adanlokonon, E. A. S., Kanhounnon, W. G., Chabi, B. C., Adjahouinou, D. C., Koumolou, L., Bonou, B., Fiogbe, E. D., & Edorh, P. A. (2018). Physicochemical and microbiological characterization of effluents from the “Centre Hospitalier Universitaire de la Mère et de l’Enfant Lagune (CHU-MEL)” discharged in the Cotonou lagoon in Benin. International Journal of Biological and Chemical Sciences, 12(4), 1955. https://doi.org/10.4314/ijbcs.v12i4.34

Addae-Nuku, D. S., Kotey, F. C., Dayie, N. T., Osei, M.-M., Tette, E. M., Debrah, P., & Donkor, E. S. (2022). Multidrug-Resistant Bacteria in Hospital Wastewater of the Korle Bu Teaching Hospital in Accra, Ghana. Environmental Health Insights, 16, 117863022211306. https://doi.org/10.1177/11786302221130613

Ahmed, N. O., Gasmelseed, G. A., & Musa, A. E. (2014). Assessment of Medical Solid Waste Management in Khartoum State Hospitals.

Al-Khafaji, S. A., & Al-Rekabi, W. S. (2021). Evaluation of the hospital’s wastewater treatment plant in basrah province. Journal of Physics: Conference Series, 1973(1), 012033. https://doi.org/10.1088/1742-6596/1973/1/012033

APHA. (2017). Standard methods for the examination of water and wastewater (23rd ed.). Washington, DC: American Public Health Association.

Ballante, F., Turkina, M. V., Ntzouni, M., Magnusson, K.-E., & Vikström, E. (2023). Modified N-acyl-L-homoserine lactone compounds abrogate Las-dependent quorum-sensing response in human pathogen Pseudomonas aeruginosa. Frontiers in Molecular Biosciences, 10, 1264773. https://doi.org/10.3389/fmolb.2023.1264773

Ben-David, A., & Davidson, C. E. (2014). Estimation method for serial dilution experiments. Journal of Microbiological Methods, 107, 214–221. https://doi.org/10.1016/j.mimet.2014.08.023

CLSI. Performance Standards for Antimicrobial Susceptibility Testing. 30th Ed. CLSI supplement M100. Wayne, PA: Clinical and Laboratory Standards Institute; 2020.

Custodio, M., Cuadrado-Campó, W., Peñaloza, R., Vicuña-Orihuela, C., Torres-Gutiérrez, E., & Orellana, E. (2022). Treatment of Hospital Wastewater Using Activated Sludge with Extended Aeration. Journal of Ecological Engineering, 23(11), 24–32. https://doi.org/10.12911/22998993/152991

Daoud, N., Hamdoun, M., Hannachi, H., Gharsallah, C., Mallekh, W., & Bahri, O. (2020). Antimicrobial Susceptibility Patterns of Escherichia coli among Tunisian Outpatients with Community-Acquired Urinary Tract Infection (2012-2018). Current Urology, 14(4), 200–205. https://doi.org/10.1159/000499238

Derakhshan, S., Navidinia, M., & Haghi, F. (2021). Antibiotic susceptibility of human-associated Staphylococcus aureus and its relation to agr typing, virulence genes, and biofilm formation. BMC Infectious Diseases, 21(1), 627. https://doi.org/10.1186/s12879-021-06307-0

Gaşpar, C.-M., Cziszter, L. T., Lăzărescu, C. F., Ţibru, I., Pentea, M., & Butnariu, M. (2021). Antibiotic Resistance among Escherichia coli Isolates from Hospital Wastewater Compared to Community Wastewater. Water, 13(23), 3449. https://doi.org/10.3390/w13233449

Gutierrez, C., Somoskovi, A., Natarajan, K., & Bell, D. (2018). Need for better adherence to optimal incubation temperature for quality laboratory diagnostics and antibiotic resistance monitoring. African Journal of Laboratory Medicine, 7(2). https://doi.org/10.4102/ajlm.v7i2.789

Horner, C., Mushtaq, S., Allen, M., Hope, R., Gerver, S., Longshaw, C., Reynolds, R., Woodford, N., & Livermore, D. M. (2021). Replacement of Enterococcus faecalis by Enterococcus faecium as the predominant enterococcus in UK bacteraemias. JAC-Antimicrobial Resistance, 3(4), dlab185. https://doi.org/10.1093/jacamr/dlab185

Hossain, N., Roni, M. R. H., & Alif, A. (2023). The Characterization of Medical Wastewater and Appropriate Treatment Strategies in Dhaka, Bangladesh: A Comparative Analysis of Public Hospitals. Engineering Proceedings, 56(1), 59. https://doi.org/10.3390/ASEC2023-15392

Khan, N. A., Ahmed, S., Farooqi, I. H., Ali, I., Vambol, V., Changani, F., Yousefi, M., Vambol, S., Khan, S. U., & Khan, A. H. (2020). Occurrence, sources and conventional treatment techniques for various antibiotics present in hospital wastewaters: A critical review. TrAC Trends in Analytical Chemistry, 129, 115921. https://doi.org/10.1016/j.trac.2020.115921

Korzeniewska, E., Korzeniewska, A., & Harnisz, M. (2013). Antibiotic resistant Escherichia coli in hospital and municipal sewage and their emission to the environment. Ecotoxicology and environmental safety, 91, 96–102. https://doi.org/10.1016/j.ecoenv.2013.01.014

Mahmood, H. Y., Jamshidi, S., Mark Sutton, J. & Khondaker, M. R. (2016). Current Advances in Developing Inhibitors of Bacterial Multidrug Efflux Pumps. Current Medicinal Chemistry, 23(10), 1062–1081. https://doi.org/10.2174/0929867323666160304150522

Marutescu, L. G., Popa, M., Gheorghe-Barbu, I., Barbu, I. C., Rodríguez-Molina, D., Berglund, F., Blaak, H., Flach, C.-F., Kemper, M. A., Spießberger, B., Wengenroth, L., Larsson, D. G. J., Nowak, D., Radon, K., De Roda Husman, A. M., Wieser, A., Schmitt, H., Pircalabioru Gradisteanu, G., Vrancianu, C. O., & Chifiriuc, M. C. (2023). Wastewater treatment plants, an “escape gate” for ESCAPE pathogens. Frontiers in Microbiology, 14, 1193907. https://doi.org/10.3389/fmicb.2023.1193907

Momenah, A. M., Bakri, R. A., Jalal, N. A., Ashgar, S. S., Felemban, R. F., Bantun, F., Hariri, S. H., Barhameen, A. A., Faidah, H., & AL-Said, H. M. (2023). Antimicrobial Resistance Pattern of Pseudomonas aeruginosa: An 11-Year Experience in a Tertiary Care Hospital in Makkah, Saudi Arabia. Infection and Drug Resistance, Volume 16, 4113–4122. https://doi.org/10.2147/IDR.S409726

Mustafa, S. S., Batool, R., Kamran, M., Javed, H., & Jamil, N. (2022). Evaluating the Role of Wastewaters as Reservoirs of Antibiotic-Resistant ESKAPEE Bacteria Using Phenotypic and Molecular Methods. Infection and Drug Resistance, Volume 15, 5715–5728. https://doi.org/10.2147/IDR.S368886

Ngoi, S. T., Chong, C. W., Ponnampalavanar, S. S. L. S., Tang, S. N., Idris, N., Abdul Jabar, K., Gregory, M. J., Husain, T., & Teh, C. S. J. (2021). Genetic mechanisms and correlated risk factors of antimicrobial-resistant ESKAPEE pathogens isolated in a tertiary hospital in Malaysia. Antimicrobial Resistance & Infection Control, 10(1), 70. https://doi.org/10.1186/s13756-021-00936-5

O’Toole, G. A. (2016). Classic Spotlight: Plate Counting You Can Count On. Journal of Bacteriology, 198(23), 3127–3127. https://doi.org/10.1128/JB.00711-16

Odoyo, E., Matano, D., Tiria, F. ,Georges, M., Kyanya, C., Wahome, S., Mutai, W., & Musila, L. (2023). Environmental contamination across multiple hospital departments with multidrug-resistant bacteria pose an elevated risk of healthcare-associated infections in Kenyan hospitals. Antimicrob Resist Infect Control, 12(1), 22. https://doi.org/10.1186/s13756-023-01227-x

Pandey, R., Mishra, S. K., & Shrestha, A. (2021). Characterization of ESKAPE Pathogens with Special Reference to Multidrug Resistance and Biofilm Production in a Nepalese Hospital. Infection and Drug Resistance, Volume 14, 2201–2212. https://doi.org/10.2147/IDR.S306688

Paulshus, E.; Kühn, I.; Möllby, R.; Colque, P.; O’Sullivan, K.; Midtvedt, T.; Lingaas, E.; Holmstad, R.; Sørum, H. Diversity and antibiotic resistance among Escherichia coli populations in hospital and community wastewater compared to wastewater at the receiving urban treatment plant. Water Res. 2019, 161, 232–241.

Popa, L. I., Gheorghe, I., Barbu, I. C., Surleac, M., Paraschiv, S., Măruţescu, L., Popa, M., Pîrcălăbioru, G. G., Talapan, D., Niţă, M., Streinu-Cercel, A., Streinu-Cercel, A., Oţelea, D., & Chifiriuc, M. C. (2021). Multidrug Resistant Klebsiella pneumoniae ST101 Clone Survival Chain from Inpatients to Hospital Effluent After Chlorine Treatment. Frontiers in Microbiology, 11, 610296. https://doi.org/10.3389/fmicb.2020.610296

Ruekit, S., Srijan, A., Serichantalergs, O., Margulieux, K. R., Mc Gann, P., Mills, E. G., Stribling, W. C., Pimsawat, T., Kormanee, R., Nakornchai, S., Sakdinava, C., Sukhchat, P., Wojnarski, M., Demons, S. T., Crawford, J. M., Lertsethtakarn, P., & Swierczewski, B. E. (2022). Molecular characterization of multidrug-resistant ESKAPEE pathogens from clinical samples in Chonburi, Thailand (2017–2018). BMC Infectious Diseases, 22(1), 695. https://doi.org/10.1186/s12879-022-07678-8

Santajit, S., & Indrawattana, N. (2016). Mechanisms of Antimicrobial Resistance in ESKAPE Pathogens. BioMed Research International, 2016, 1–8. https://doi.org/10.1155/2016/2475067

Sattari-Maraji, A., Jabalameli, F., Node Farahani, N., Beigverdi, R., & Emaneini, M. (2019). Antimicrobial resistance pattern, virulence determinants and molecular analysis of Enterococcus faecium isolated from children infections in Iran. BMC Microbiology, 19(1), 156. https://doi.org/10.1186/s12866-019-1539-y

Seguni, N. Z., Kimera, Z. I., Msafiri, F., Mgaya, F. X., Joachim, A., Mwingwa, A., & Matee, M. I. (2023). Multidrug-resistant Escherichia coli and Klebsiella pneumoniae isolated from hospital sewage flowing through community sewage system and discharging into the Indian Ocean. Bulletin of the National Research Centre, 47(1), 66. https://doi.org/10.1186/s42269-023-01039-4

Shilpakar, A., Ansari, M., Rai, K. R., Rai, G., & Rai, S. K. (2021). Prevalence of multidrug-resistant and extended-spectrum beta-lactamase producing Gram-negative isolates from clinical samples in a tertiary care hospital of Nepal. Tropical Medicine and Health, 49(1), 23. https://doi.org/10.1186/s41182-021-00313-3

Wang, M., Wei, H., Zhao, Y., Shang, L., Di, L., Lyu, C., & Liu, J. (2019). Analysis of multidrug-resistant bacteria in 3223 patients with hospital-acquired infections (HAI) from a tertiary general hospital in China. Bosnian Journal of Basic Medical Sciences, 19(1), 86–93. https://doi.org/10.17305/bjbms.2018.3826

Yakut, N., Ergenç, Z., Bayraktar, S., Akbolat, İ., Sayin, E., İLki̇, A., & Kepenekli̇, E. (2024). Antimicrobial Susceptibility Results and Characterization of Skin and Soft Tissue Infections Caused by Staphylococcus aureus in Children. Flora the Journal of Infectious Diseases and Clinical Microbiology, 29(1), 85–95. doi: 10.5578/flora.202401868

Zarb, P., Coignard, B., Griskeviciene, J., Muller, A., Vankerckhoven, V., Weist, K., Goossens, M., Vaerenberg, S., Hopkins, S., Catry, B., Monnet, D., Goossens, H., Suetens, C., National Contact Points for the ECDC pilot point prevalence survey, & Hospital Contact Points for the ECDC pilot point prevalence survey (2012). The European Centre for Disease Prevention and Control (ECDC) pilot point prevalence survey of healthcare-associated infections and antimicrobial use. Euro surveillance: bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin, 17(46), 20316. https://doi.org/10.2807/ese.17.46.20316-en

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Published

2026-07-01

How to Cite

Shrestha, G., Kumal, B., Acharya, J. N., Paudel, S., & Manandhar, S. (2026). ISOLATION AND IDENTIFICATION OF ESKAPEE PATHOGENS IN HOSPITAL WASTEWATER OF KATHMANDU VALLEY. Journal of Institute of Science and Technology, 31(1), 221–230. https://doi.org/10.3126/jist.v31i1.93219

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Research Articles