- Administration and Management Review
- Asian Journal of Medical Sciences
- Banko Janakari
- Bodhi: An Interdisciplinary Journal
- Botanica Orientalis: Journal of Plant Science
- Bulletin of the Department of Geology
- Bulletin of the Department of Plant Resources
- Dhaulagiri Journal of Sociology and Anthropology
- Economic Journal of Development Issues
- Economic Journal of Nepal
- Ecoprint: An International Journal of Ecology
- Himalayan Journal of Sciences
- Himalayan Journal of Sociology and Anthropology
- Himalayan Review
- Hydro Nepal: Journal of Water, Energy and Environment
- International Journal of Life Sciences
- Journal of Agriculture and Environment
- Journal of College of Medical Sciences-Nepal
- Journal of Food Science and Technology Nepal
- Journal of Forest and Livelihood
- Journal of Institute of Medicine
- Journal of Natural History Museum
- Journal of NELTA
- Journal of Nepal Chemical Society
- Journal of Nepal Geological Society
- Journal of Nepal Paediatric Society
- Journal of Nepalese Business Studies
- Journal of Political Science
- Journal of the Institute of Agriculture and Animal Science
- Journal of the Institute of Engineering
- Journal of Wetlands Ecology
- Kathmandu University Medical Journal
- Kathmandu University Journal of Science, Engineering and Technology
- Medical Journal of Shree Birendra Hospital
- Nepal Agricultural Research Journal
- Nepal Journal of Biotechnology
- Nepal Journal of Forestry
- Nepal Journal of Obstetrics and Gynaecology
- Nepal Journal of Science and Technology
- Nepalese Journal of Engineering
- Nepalese Journal of Qualitative Research Methods
- Occasional Papers in Sociology and Anthropology
- Our Nature
- SAARC Journal of Tuberculosis, Lung Diseases and HIV/AIDS
- Scientific World
- Socio-Economic Development Panorama
- The Initiation
- The Third Pole: Journal of Geography Education
- Tribhuvan University Journal
- TULSSAA Journal
- Voice of History
- Water Nepal
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